“安装软件包"FILE_PATH"的退出状态为非零"在R中 [英] "installation of package 'FILE_PATH' had non-zero exit status" in R

问题描述

通过使用以下命令在R中安装软件包:

By installing the package in R using the following command:

install.packages('FILE_PATH', repos=NULL, type = "source")

我遇到以下错误:

将软件包安装到"/home/p/R/x86_64-pc-linux-gnu-library/3.0" (因为未指定"lib") rawToChar(block [seq_len(ns)])中的错误: 字符串中嵌入的nul:'PK \ 003 \ 004 \ 024 \ 0 \ 002 \ 0 \ b \ 0] \ xadVCr \ xcb \ xea \ xfcR \ 0 \ 0 \ 0 \ xa7 \ 0 \ 0 \ 0 \ 0 \ 027 \ 0 \ 0 \ 0bivpois-Rcode/.Rhistory + \ xce/-JN \ xd5PO \ xca，+ \ xc8 \ xcf，\ xd6 + IL \ xcaI \ xd5 \ vR \ xd7 \ xe4 \ xe5 * \ x86J \ xe5 \ xe4 \ xea ％\ 025` \ b \ xa5d \ xa2 \ v楖\ xe7％\ xe6' 警告信息: 在install.packages("/home/p/Research/14_bivpois-Rcode.zip"中，repos = NULL，: 软件包"/home/p/Research/14_bivpois-Rcode.zip"的安装退出状态为非零

Installing package into ‘/home/p/R/x86_64-pc-linux-gnu-library/3.0’ (as ‘lib’ is unspecified) Errore in rawToChar(block[seq_len(ns)]) : embedded nul in string: 'PK\003\004\024\0\002\0\b\0]\xadVCr\xcb\xea\xfcR\0\0\0\xa7\0\0\0\027\0\0\0bivpois-Rcode/.Rhistory+\xce/-JN\xd5PO\xca,+\xc8\xcf,\xd6+IL\xcaI\xd5\vR\xd7\xe4\xe5*\x86J\xe5\xe4\xea%\025`\b\xa5d\xa2\v楖\xe7%\xe6' Warning message: In install.packages("/home/p/Research/14_bivpois-Rcode.zip", repos = NULL, : installation of package ‘/home/p/Research/14_bivpois-Rcode.zip’ had non-zero exit status

R版本是3.0.2 (2013-09-25) -- "Frisbee Sailing"，操作系统是Linux Mint(UNIX).

The R version is the 3.0.2 (2013-09-25) -- "Frisbee Sailing" and the OS is Linux Mint (UNIX).

我为什么会收到该错误及其含义:

Why Do I get that error and what does it mean:

安装软件包"/home/p/Research/14_bivpois-Rcode.zip"的退出状态为非零

installation of package ‘/home/p/Research/14_bivpois-Rcode.zip’ had non-zero exit status

在R中?

您可以在此处和文件是来源.

You can find the package here and the file 14_bivpois-Rcode.zip is the source.

我尝试将其安装在本地，并且该路径是正确的路径.

I tried to install that locally and the path is the correct one.

是否有建议在UNIX中安装该软件包?

Any suggestion to install that package in UNIX?

推荐答案

作者提供的.zip文件不是有效的R程序包，他们确实声明源文件是R中的直接使用"文件(通过我认为它们意味着有必要手动加载所包含的函数). non-zero exit status只是表明在软件包"的安装过程中发生了错误.

The .zip file provided by the authors is not a valid R package, and they do state that the source is for "direct use" in R (by which I assume they mean it's necessary to load the included functions manually). The non-zero exit status simply indicates that there was an error during the installation of the "package".

您可以手动提取存档，然后使用例如source('bivpois.table.R')加载其中的功能，也可以下载它们提供的.RData文件，然后使用load('.RData')将其加载到工作区中.这不会将功能作为软件包的一部分安装；而是将功能加载到您的全局环境中，使其暂时可用.

You can extract the archive manually and then load the functions therein with, e.g., source('bivpois.table.R'), or you can download the .RData file they provide and load that into the workspace with load('.RData'). This does not install the functions as part of a package; rather, it loads the functions into your global environment, making them temporarily available.

您可以按照以下步骤从R下载，提取和加载.RData:

You can download, extract, and load the .RData from R as follows:

download.file('http://stat-athens.aueb.gr/~jbn/papers/files/14/14_bivpois_RDATA.zip', 
              f <- tempfile())
unzip(f, exdir=tempdir())
load(file.path(tempdir(), '.RData'))

如果您希望.RData文件在当前工作目录中可用，并在将来加载，则可以使用以下代码代替:

If you want the .RData file to be available in the current working directory, to be loaded in the future, you could use the following instead:

download.file('http://stat-athens.aueb.gr/~jbn/papers/files/14/14_bivpois_RDATA.zip', 
              f <- tempfile())
unzip(f, exdir=tempdir())
file.copy(file.path(tempdir(), '.RData'), 'bivpois.RData')
# the above copies the .RData file to a file called bivpois.RData in your current 
# working directory.
load('bivpois.RData')

在以后的R会话中，您只需拨打load('bivpois.RData').

In future R sessions, you can just call load('bivpois.RData').

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