在rgdal"gdal-config"中配置错误. [英] Configure error in rgdal "gdal-config"

问题描述

我目前正在Linux集群上的R中运行一些物种分布建模和丰富度映射.为了运行分析，我需要安装rgdal，以便建模包中的栅格函数正常运行.我已经安装了proj4和gdal.但是，当我尝试安装rgdal时，出现错误消息:

I am currently running some species distribution modelling and richness mapping in R on a linux cluster. In order to run my analyses I need to install rgdal so that the raster function in my modelling package works correctly. I have installed proj4 and gdal already. However when I attempt to install rgdal I get an error message:

checking for gdal-config... no
no

configure: error: gdal-config not found or not executable.
ERROR: configuration failed for package 'rgdal'

这是我用来安装rgdal软件包的命令:

This is the command I used to install rgdal package:

install.packages("rgdal", configure.args=c("--with-proj-include=/home/nikhail1/bin/proj-4.9.2/bin", "--with-proj-lib=/home/nikhail1/bin/proj-4.9,2/lib"))

尽管有gdal-config错误，但gdal似乎已安装到我的本地系统上(二进制和库文件夹位于我安装它们的地址中).在gdal安装过程中，我也没有看到任何错误消息.为什么会发生此错误?如何让R识别已安装此依赖项，或者确实存在问题，如何识别它?我在网上找到的大多数解决方案都是针对我未使用的Debian和Ubuntu系统的.我无权使用sudo apt-get或yum命令.我只安装了proj 4.9.2，我是否缺少对gdal的依赖?

However despite the gdal-config error, gdal seems to be installed onto my local system (the binary and library folders are present in the address to which I installed them). I also did not see any error messages during the gdal installation process. Why is this error occurring? How do I get R to recognize that this dependency is installed, or indeed if there is a problem how do I identify it? Most of the solutions I have found online are specific to Debian and Ubuntu systems which I am not using. I do not have authority to use sudo apt-get or yum commands. Are there any dependencies of gdal I am missing, as I have only installed proj 4.9.2?

我是linux系统的新手，还有rgdal和gdal软件包.

I am new to the linux system, and the rgdal and gdal packages.

非常感谢您的协助

亲切的问候，

尼哈伊尔

推荐答案

在Linux上的R中安装RGDAL

在R中运行此命令:

Installing RGDAL in R on Linux

Run this command in R:

# install package from CRAN
# but specify the library director
# the download method
# and the configuration arguments
# to allow for source installs
install.packages( pkgs = "rgdal"
                    , lib = "./R_Packages"
                    , method = "curl"
                    , configure.args = c(
                                   "--with-gdal-config=/Library/Frameworks/GDAL.framework/Programs/gdal-config"
                                   , "--with-proj-include=/p/home/bin/proj4/include"
                                   , "--with-proj-lib=/p/home/bin/proj4/lib"
                                     ) 
      )

答案来自交叉引用在LINUX系统上安装rgdal时出错?和无法安装rgdal .

这篇关于在rgdal"gdal-config"中配置错误.的文章就介绍到这了，希望我们推荐的答案对大家有所帮助，也希望大家多多支持IT屋！