R的ImageJ包 [英] ImageJ package for R

问题描述

我正在寻找ImageJ和R的集成。在[1] [2]中为R的先前版本引用了一个名为RImageJ的包（我正在使用R 3.1.2（2014-10-31） ） - 南瓜头盔）但它不再可用。

I'm looking for an integration of ImageJ and R. There was a package called RImageJ as referenced in [1][2] for previous versions of R (I'm using R 3.1.2 (2014-10-31) -- "Pumpkin Helmet" ) but it isn't available anymore.

基本上我想尝试的是在R中的图像上的区域生长算法。有没有人知道RImageJ的更新版本或允许这种算法的其他软件包？。

Basically what I'd like to try is a region growing algorithm over an image in R. Does anybody know about an updated version of RImageJ or another package allowing this algorithm?.

谢谢;）

[1] http://romainfrancois.blog.free.fr/ index.php？category / R-package / RImageJ
[2] http ：//cmi.embl.de/documents/101105ij_r_jython#using_imagej_from_r

推荐答案

Bio7 项目是ImageJ的一个版本，它与R集成，其他改进。

The Bio7 project is a version of ImageJ which features integration with R, among other improvements.

值得一提的是， ImageJ2项目正在开发一个名为 scripting-r 的项目，旨在提供一个JSR-223兼容的脚本语言建立在 RServe 之上。但是，它尚未发挥作用。一旦完成，就可以从ImageJ的脚本编辑器中执行R代码作为脚本。

It is also worth mentioning that the ImageJ2 project has a project under development called scripting-r, which seeks to provide a JSR-223-compliant scripting language built on top of RServe. However, it is not yet functional. Once it is, it will be possible to execute R code as a script from within ImageJ's Script Editor.

编辑2016-09-26：在撰写本文时，SciJava scripting-r 项目现在建立在 Renjin ，是JVM顶层的R实现。 Huzzah！

Edit 2016-09-26: As of this writing, the SciJava scripting-r project is now built on Renjin, an implementation of R on top of the JVM. Huzzah!

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