Jupyter中的R内联图 [英] R inline plots in Jupyter

问题描述

我试图通过 Binder 项目界面在Jupyter中运行R，尽管问题可能更笼统.例如，该问题可能与长期休眠的问题 a>关于Mac OS上的Jupyter.我通过 conda 添加了r-essentials，r-rzmq和r-repr. IRKernel和IRDisplay是r-essentials的一部分.但是，当我尝试绘制任何东西时，没有输出.确实，似乎没有图形输出选项.我在这里想念什么?在python笔记本中没有问题，但是R没有运气.

I am trying to run R in Jupyter through the Binder project interface, though the question may be more general. For instance it question may be related the long-dormant one about Jupyter on Mac OS. I have the r-essentials, r-rzmq and r-repr added through conda. IRKernel and IRDisplay are part of r-essentials. However, when I try to plot anything, there is no output. Indeed, it looks like there are no graphics output options. What am I missing here? There is no problem in python notebooks, but no luck with R.

capabilities()
jpeg FALSE
png FALSE
tiff FALSE
tcltk TRUE
X11 FALSE
aqua FALSE
http/ftp TRUE
sockets TRUE
libxml TRUE
fifo TRUE
cledit FALSE
iconv TRUE
NLS TRUE
profmem TRUE
cairo FALSE
ICU TRUE
long.double TRUE
libcurl TRUE

推荐答案

好，所以@hrbrmstr指出U. Anaconda'.我可以内联绘图通过使用Dockerfile来工作，并使用apt-get IRKernel安装R根据官方指示通过CRAN:

OK, so as @hrbrmstr points out 'Ugh. Anaconda'. I could get inline plotting to work by using a Dockerfile, and installing R using apt-get IRKernel via CRAN, as per official instructions:

# Set default CRAN repo
RUN echo 'options("repos"="http://cran.rstudio.com")' > .Rprofile

# Install IRkernel
RUN Rscript -e "install.packages(c('repr', 'IRdisplay', 'evaluate', 'crayon', 'pbdZMQ', 'devtools', 'uuid', 'digest'))" -e "devtools::install_github('IRkernel/IRkernel')" -e "IRkernel::installspec(user = FALSE)"

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