如何在R代码块内创建R-markdown部分?具有正确的代码显示 [英] How to create R-markdown sections inside a R code chunk? With proper code display

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问题描述

我目前正在用rmarkdown编写报告,因此我想在r代码块内创建节.我发现可以借助 cat() results ="asis" 来实现. 这种解决方案的问题是,我的R代码结果和代码无法像往常一样正确显示.

I am currently writing on a report with rmarkdown and therefore I want to create sections inside a r code chunk. I figured out that this is possible with the help of cat() and results="asis". My problem with this solution is, that my R code results and code isn't properly displayed as usual.

例如

---
title: "test"
output: pdf_document
---

```{r, results='asis'}
for (i in 1:10) {
  cat("\\section{Part:", i, "}")
  print(summary(lm(data=X, X1~X2))
  $\alpha = `r X[1,i]`$  
}
```

几乎可以解决问题,但是这里仍然存在两个问题:

pretty much does the trick, but here there are still two problems:

  • summary()的R输出显示非常奇怪,因为我猜它被解释为LaTeX代码
  • 在这种环境下我无法使用LaTeX公式,因此,如果我希望每个部分都以一个方程式结尾(也可能使用R变量),则不可能
  • the R output for summary() is displayed very strange because I guess it`s interpreted as LaTeX code
  • I can't use LaTeX formulas in this enviroment, so if I want every section to end with a equation, which also might use a R variable, this is not possible

有人知道解决方案吗,还是有解决方法在循环中创建节并在此节中具有R代码,R输出和LaTeX公式?

Does somebody know a solution for this, or is there even a workaround to create sections within a loop and to have R code, R output and LaTeX formulas in this section?

我非常感谢每种建议:)

I am very thankful for every kind of advice :)

推荐答案

使用降价促销和逐字记录环境

您可以在verbatim环境中包围R输出,在四个大块中的\中转义代码.

Using markdown and the verbatim environment

You could surround R output with verbatim environment, escape code with four \in chunks.

```{r, results='asis'}
for (i in 1:10) {
  cat("\\section{Part:", i, "}")
  cat("\\begin{verbatim}")
  print(summary(lm(data=mtcars, mtcars[,1]~ mtcars[,i])))
  cat("\\end{verbatim}")
  cat(paste0("$\\\\alpha$ = ", mtcars[1,i]))  
}
```

在某个时候,运行乳胶时,我倾向于退出markdown(.Rmd)并使用sweave(.Rnw),我发现它要容易得多,您可以检查.tex文件中发生的情况并找出问题所在.

At some point, when running latex, I tend to quit markdown (.Rmd) and use sweave (.Rnw), I find it much more easy, you can check what's happening in .tex files and figure out what's wrong.

\documentclass[a4paper]{article}
\usepackage{listings}
\usepackage[usename,dvipsnames]{xcolor}
% create a set of colors
\definecolor{mygreen}{rgb}{0,0.6,0} 
\definecolor{mygray}{rgb}{0.5,0.5,0.5}
\definecolor{mymauve}{rgb}{0.58,0,0.82}
% create a listings environment suitable for R code
\lstset{ %
  backgroundcolor=\color{white},   % choose the background color; you must add \usepackage{color} or \usepackage{xcolor}
  basicstyle=\footnotesize\ttfamily, % the size of the fonts that are used for the
  % code
  breakatwhitespace=false,         % sets if automatic breaks should only happen at whitespace
  breaklines=true,                 % sets automatic line breaking
  captionpos=b,                    % sets the caption-position to bottom
  commentstyle=\color{mygreen},      % comment style
  deletekeywords={...},            % if you want to delete keywords from the given language
  escapeinside={\%*}{*)},          % if you want to add LaTeX within your code
  extendedchars=true,              % lets you use non-ASCII characters; for 8-bits encodings only, does not work with UTF-8
  frame=single,                    % adds a frame around the code
  keepspaces=true,                 % keeps spaces in text, useful for keeping indentation of code (possibly needs columns=flexible)
  keywordstyle=\color{blue},       % keyword style
  language=R,                       % the language of the code
  morekeywords={*,...},            % if you want to add more keywords to the set
  numbers=left,                    % where to put the line-numbers; possible values are (none, left, right)
  numbersep=5pt,                   % how far the line-numbers are from the code
  numberstyle=\tiny\color{mygray},   % the style that is used for the line-numbers
  rulecolor=\color{black},         % if not set, the frame-color may be changed on line-breaks within not-black text (e.g. comments (green here))
  showspaces=false,                % show spaces everywhere adding particular underscores; it overrides 'showstringspaces'
  showstringspaces=false,          % underline spaces within strings only
  showtabs=false,                  % show tabs within strings adding particular underscores
  stepnumber=2,                    % the step between two line-numbers. If it is 1, each line will be numbered
  stringstyle=\color{mymauve},      % string literal style
  tabsize=2,                       % sets default tabsize to 2 spaces
  title=\lstname                   % show the filename of files included with \lstinputlisting; also try caption instead of title
}
\title{test}
\begin{document}
\maketitle

<<r, results='asis'>>=
for (i in 1:10) {
  cat("\\section{Part:", i, "}")
  cat("\\begin{lstlisting}")
  print(summary(lm(data=mtcars, mtcars[,1]~ mtcars[,i])))
  cat("\\end{lstlisting}")
  cat(paste0("$\\\\alpha$ = ", mtcars[1,i]))  
}
@

\end{document}

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