如何将Rmarkdown文件编织到嵌入绘图的html文件中? [英] How can I knit a Rmarkdown file into a html file which embeds plots?

问题描述

例如，在Rmd文件中，有多个地方可以生成绘图.

In a Rmd file, there are several places which generate plots, for example

```{r outliers}
influencePlot (model1)
```

通过在R会话中运行，我将该文件编织为html文件和目录./figure/下的多个图像文件

I knit the file into a html file and several image files under directory ./figure/, by running in a R session

> library(knitr)
> knit("my.Rmd")

然后在bash会话中运行

and then running in a bash session

$ pandoc my.md -f markdown -t html -s -o my.html

但是html文件没有嵌入图像文件中的图，例如:

but the html file doesn't embed the plots from the image files, for example:

<img src="figure/outliers-1.png" alt="plot of chunk outliers" />

我想知道如何使html文件嵌入图像文件中的图并变得独立吗?

I was wondering how I could make the html file embed the plots from the image files and become self contained?

在RStudio中，当我单击编织到html"按钮时，例如，将绘图图像嵌入html文件中

In RStudio, when I click "knit to html" button, it embeds the plot images in html file, for example

<p><img src="data:image/png;base64,iVBORw0KGgoAAAANSUhE...

RStudio的编织到html"按钮的等效命令是什么?

What is the equivalent commands to RStudio's "knit to html" button?

谢谢.

推荐答案

RStudio的编织到html"按钮的等效命令是什么?

What is the equivalent commands to RStudio's "knit to html" button?

在YAML标头中提交输出，然后使用

Submit your output in a YAML header and then use

rmarkdown::render("Your-RMD-file.Rmd")

或参见render函数及其参数的文档.

Or see the documentation for the render function and their arguments.

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