非法参考AWK数组（我有麻烦搞清楚AWK） [英] Illegal reference to an array in awk (I am having trouble figuring out awk)

问题描述

我想使用的脚本是：

cat gatk_probes.interval_list |
awk '
BEGIN{
   OFS="\t";
   print "#CHR\tBP1\tBP2\tID"
}
{
   split($1,a,":");
   chr=a[1];
   if (match(chr,"chr")==0) {
      chr="chr"chr
   }
   split(a[2],b,"-");
   bp1=b[1];
   bp2=bp1;
   if (length(b) > 1) {
      bp2=b[2]
   }
   print chr,bp1,bp2,NR
}' > ./EXOME.targets.reg

我收到错误：

awk: line 1: illegal reference to array b

有什么明显错误？

Is there something obviously wrong?

推荐答案

长度（B）是搞乱你，显然不是AWK的每一个执行支持它。你可以这样做，但：

length(b) is messing you up, apparently not every implementation of awk supports it. You can do this though:

BEGIN
{
    OFS="\t"; 
    print "#CHR\tBP1\tBP2\tID"
}
{
    split($1,a,":"); 
    chr=a[1]; 
    if (match(chr,"chr")==0) 
    {
        chr="chr"chr
    }
    blength = split(a[2],b,"-"); 
    bp1=b[1]; 
    bp2=bp1; 
    if (blength > 1) 
    {
        bp2=b[2]
    }
    print chr,bp1,bp2,NR
}

分裂返回数组中的元素（B在这种情况下）的数目。

split returns the number of elements in the array (b in this case).

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