dask计算不并行执行 [英] dask computation not executing in parallel
问题描述
我有一个json文件的目录,我试图转换为一个dask DataFrame并保存到castra。
有200个文件,在它们之间包含O(10 ** 7)个json记录。
代码很简单,主要是下面的教程示例。
I have a directory of json files that I am trying to convert to a dask DataFrame and save it to castra. There are 200 files containing O(10**7) json records between them. The code is very simple largely following tutorial examples.
import dask.dataframe as dd
import dask.bag as db
import json
txt = db.from_filenames('part-*.json')
js = txt.map(json.loads)
df = js.to_dataframe()
cs=df.to_castra("data.castra")
在32核机器上运行它,但代码只使用一个核心在100%。
我从文档的理解是这个代码并行执行。
为什么不是?
我误解了什么?
I am running it on a 32 core machine, but the code only utilizes one core at 100%. My understanding from the docs is that this code execute in parallel. Why is it not? Did I misunderstand something?
推荐答案
你的最终集合是一个dask dataframe,默认使用线程,必须明确告诉dask使用进程。
Your final collection is a dask dataframe, which uses threads by default, you will have to explicitly tell dask to use processes.
您可以全局执行
import dask
import dask.multiprocessing
dask.set_options(get=dask.multiprocessing.get)
或只在 to_castra
调用
df.to_castra("data.castra", get=dask.multiprocessing.get)
此外,只是作为一个警告,Castra主要是一个实验。它的速度非常快,但也不像HDF5那样成熟。
Also, just as a warning, Castra was mostly an experiment. It's decently fast but also not nearly mature as something like HDF5.
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