dplyr left_join小于,大于条件 [英] dplyr left_join by less than, greater than condition

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问题描述

这个问题与有效地合并有关的问题有些相关两个数据框架是非平凡的标准检查日期是否在r 之间的两个日期之间。而且我在这里发布的请求是否存在该功能:
GitHub issue



我正在使用 dplyr :: left_join()加入两个数据框。我使用的条件是小于,比 <= > 更大。 dplyr :: left_join()是否支持此功能?或者这些键只能在它们之间使用 = 操作符。这是直接从SQL运行(假设我有数据库中的数据框)



这是一个MWE:我有两个数据集一个公司年( fdata ),其次是每5年发生一次调查数据。因此,在两年内的 fdata 中的所有年份,我加入了相应的调查年度数据。

  id < -  c(1,1,1,1,
2,2,2,2,2,2,
3,3,3, 3,3,3,
5,5,5,5,
8,8,8,8,
13,13,13)

fyear< ; - c(1998,1999,2000,2001,1998,1999,2000,2001,2002,2003,
1998,1999,2000,2001,2002,2003,1998,1999,2000,2001,
1998,1999,2000,2001,1998,1999,2000)

byear< - c(1990,1995,2000,2005)
eyear< - c(1995, 2000,2005,2010)
val < - c(3,1,5,6)

sdata< - tbl_df(data.frame(byear,eyear,val))

fdata< - tbl_df(data.frame(id,fyear))

test1 < - left_join(fdata,sdata,by = c(fyear> = byear,fyear<eyear))

我得到


 错误:无法加入列'TRUE'x'TRUE':索引出边界




除非 left_join 可以处理该条件,但是我的语法缺少某些东西?

解决方案

使用过滤器。 (但请注意,这个答案不产生正确的 LEFT JOIN ;但是MWE给出了正确的结果,一个 INNER JOIN 代替。)



如果要求合并两个, dplyr 表没有合并的东西,所以在下面我为这个目的在两个表中做一个虚拟变量,然后过滤,然后删除 dummy

  fdata%>%
mutate(dummy = TRUE)%>%
left_join(sdata%>%mutate dummy = TRUE))%>%
过滤器(fyear> = byear,fyear< eyear)%>%
选择(-dummy)
请注意,如果您在PostgreSQL中执行此操作(例如),查询优化程序将通过 dummy 变量由以下两个查询说明证明:

 > fdata%>%
+ mutate(dummy = TRUE)%>%
+ left_join(sdata%>%mutate(dummy = TRUE))%>%
+ fyear> = byear,fyear< eyear)%>%
+ select(-dummy)%>%
+ explain()
加入:dummy
< SQL>
SELECTidASid,fyearASfyear,byearASbyear,eyearASeyear,valASval
FROM SELECT * FROM(SELECTid,fyear,TRUE ASdummy
FROMfdata)ASzzz136

LEFT JOIN

SELECTbyear,eyear,val,TRUE ASdummy
FROMsdata)ASzzz137

USING(dummy))ASzzz138
WHEREfyear> =byearANDfyear< eyear


< PLAN>
嵌套循环(cost = 0.00..50886.88 rows = 322722 width = 40)
加入过滤器:((fdata.fyear> = sdata.byear)AND(fdata.fyear< sdata.eyear) )
- > fdata上的Seq扫描(cost = 0.00..28.50 rows = 1850 width = 16)
- >物化(成本= 0.00..33.55行= 1570宽= 24)
- > Seq Scan on sdata(cost = 0.00..25.70 rows = 1570 width = 24)

并做更精细地使用SQL,使得完全相同的结果

 > tbl(pg,sql(
+ SELECT *
+ FROM fdata
+ LEFT JOIN sdata
+ ON fyear> = byear AND fyear< eyear))%> ;%
+ explain()
< SQL>
SELECTid,fyear,byear,eyear,val
FROM(
SELECT *
FROM fdata
LEFT JOIN sdata
ON fyear> = byear AND fyear< eyear)ASzzz140


< PLAN>
嵌套循环左连接(cost = 0.00..50886.88 rows = 322722 width = 40)
加入过滤器:((fdata.fyear> = sdata.byear)AND(fdata.fyear< sdata。眼睛))
- > fdata上的Seq扫描(cost = 0.00..28.50 rows = 1850 width = 16)
- >物化(成本= 0.00..33.55行= 1570宽= 24)
- > Seq Scan on sdata(cost = 0.00..25.70 rows = 1570 width = 24)


This question is somewhat related to issues Efficiently merging two data frames on a non-trivial criteria and Checking if date is between two dates in r. And the one I have posted here requesting if the feature exist: GitHub issue

I am looking to join two dataframes using dplyr::left_join(). The condition I use to join is less-than, greater-than i.e, <= and >. Does dplyr::left_join() support this feature? or do the keys only take = operator between them. This is straightforward to run from SQL (assuming I have the dataframe in the database)

Here is a MWE: I have two datasets one firm-year (fdata), while second is sort of survey data that happens once every five years. So for all years in the fdata that are in between two survey years, I join the corresponding survey year data.

id <- c(1,1,1,1,
        2,2,2,2,2,2,
        3,3,3,3,3,3,
        5,5,5,5,
        8,8,8,8,
        13,13,13)

fyear <- c(1998,1999,2000,2001,1998,1999,2000,2001,2002,2003,
       1998,1999,2000,2001,2002,2003,1998,1999,2000,2001,
       1998,1999,2000,2001,1998,1999,2000)

byear <- c(1990,1995,2000,2005)
eyear <- c(1995,2000,2005,2010)
val <- c(3,1,5,6)

sdata <- tbl_df(data.frame(byear, eyear, val))

fdata <- tbl_df(data.frame(id, fyear))

test1 <- left_join(fdata, sdata, by = c("fyear" >= "byear","fyear" < "eyear"))

I get

Error: cannot join on columns 'TRUE' x 'TRUE': index out of bounds 

Unless if left_join can handle the condition, but my syntax is missing something?

解决方案

Use a filter. (But note that this answer does not produce a correct LEFT JOIN; but the MWE gives the right result with an INNER JOIN instead.)

The dplyr package isn't happy if asked merge two tables without something to merge on, so in the following, I make a dummy variable in both tables for this purpose, then filter, then drop dummy:

fdata %>% 
    mutate(dummy=TRUE) %>%
    left_join(sdata %>% mutate(dummy=TRUE)) %>%
    filter(fyear >= byear, fyear < eyear) %>%
    select(-dummy)

And note that if you do this in PostgreSQL (for example), the query optimizer sees through the dummy variable as evidenced by the following two query explanations:

> fdata %>% 
+     mutate(dummy=TRUE) %>%
+     left_join(sdata %>% mutate(dummy=TRUE)) %>%
+     filter(fyear >= byear, fyear < eyear) %>%
+     select(-dummy) %>%
+     explain()
Joining by: "dummy"
<SQL>
SELECT "id" AS "id", "fyear" AS "fyear", "byear" AS "byear", "eyear" AS "eyear", "val" AS "val"
FROM (SELECT * FROM (SELECT "id", "fyear", TRUE AS "dummy"
FROM "fdata") AS "zzz136"

LEFT JOIN 

(SELECT "byear", "eyear", "val", TRUE AS "dummy"
FROM "sdata") AS "zzz137"

USING ("dummy")) AS "zzz138"
WHERE "fyear" >= "byear" AND "fyear" < "eyear"


<PLAN>
Nested Loop  (cost=0.00..50886.88 rows=322722 width=40)
  Join Filter: ((fdata.fyear >= sdata.byear) AND (fdata.fyear < sdata.eyear))
  ->  Seq Scan on fdata  (cost=0.00..28.50 rows=1850 width=16)
  ->  Materialize  (cost=0.00..33.55 rows=1570 width=24)
        ->  Seq Scan on sdata  (cost=0.00..25.70 rows=1570 width=24)

and doing it more cleanly with SQL gives exactly the same result:

> tbl(pg, sql("
+     SELECT *
+     FROM fdata 
+     LEFT JOIN sdata 
+     ON fyear >= byear AND fyear < eyear")) %>%
+     explain()
<SQL>
SELECT "id", "fyear", "byear", "eyear", "val"
FROM (
    SELECT *
    FROM fdata 
    LEFT JOIN sdata 
    ON fyear >= byear AND fyear < eyear) AS "zzz140"


<PLAN>
Nested Loop Left Join  (cost=0.00..50886.88 rows=322722 width=40)
  Join Filter: ((fdata.fyear >= sdata.byear) AND (fdata.fyear < sdata.eyear))
  ->  Seq Scan on fdata  (cost=0.00..28.50 rows=1850 width=16)
  ->  Materialize  (cost=0.00..33.55 rows=1570 width=24)
        ->  Seq Scan on sdata  (cost=0.00..25.70 rows=1570 width=24)

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