ggplot2嵌套的小平面图 [英] Nested facet plot with ggplot2

问题描述

如果我有一个嵌套因子，在这种情况下，我有多个包含在因子Order中的Family级别，我想创建一个

If I have a nested factor, in this case I have multiple "Family" levels that are contained in the factor "Order", I would like to potentially create a

facet_grid(Family / Order ~.)

当前

instead of the current

facet_grid(Family + Order ~.) 

基本上 - 每条订单都有一条 - 它包含在该订单内的每个家族的所有条带的旁边。我知道facet_grid（Family / Order〜。）目前是不可能的，但我将如何实现这一效果？可以用主题（）完成吗？非常感谢。 --SB

Basically -- ONE strip for every Order -- that contains next to it all strips for each family inside that Order. I know that facet_grid(Family / Order ~.) is currently not possible, but how would I achieve this effect? Could it be done with a theme()? Thank you so much. --SB

我应该在上面指出家庭和订单都是因素。数据值B由具有它们所属的族级和订单级别的物种组成。这是我的情节的代码：

I should have specified above that both Family and Order are factors. The data values B are by Species which have a Family level and Order level they belong to. Here is the code for my plot:

p <- ggplot(models, aes(B,Species)) + geom_point() + facet_grid(Family + Order ~
 .,scales="free",space="free")

以下是一些示例数据：

Here is some sample data:

structure(list(Species = c("Acanthocyclops robustus", "Acroperus harpae", 
"Alona affinis", "Ascaphus truei", "Bosmina longirostris"), Intercept = c(-36.1182388331068, 
-27.2140776216155, -25.7920464721491, -39.2233884219763, -31.4301301084581
), B = c(0.919397836908493, 0.716601987210452, 0.685455190113372, 
1.04159758611351, 0.81077051300147), Bconf = c(0.407917065756464, 
0.181611850119198, 0.254101713856315, 0.708582768458448, 0.234313394549538
), Order = c("Cyclopoida", "Diplostraca", "Diplostraca", "Anura", 
"Diplostraca"), Family = c("Cyclopidae", "Chydoridae", "Chydoridae", 
"Leiopelmatidae", "Bosminidae")), .Names = c("Species", "Intercept", 
"B", "Bconf", "Order", "Family"), row.names = c(NA, 5L), class = "data.frame")

推荐答案

使用 facet_grid 或 facet_wrap 不会构建您尝试的图形建立。但是，您可以创建一个图形列表，然后通过 gridEtrax :: grid.arrange 来绘制它们。这里是一个例子

Using facet_grid or facet_wrap will not build the graphic you are trying to build. You can, however, build a list of graphics and then plot them via gridEtrax::grid.arrange. Here is an example

library(ggplot2)
library(gridExtra)
library(dplyr)

dat <-
  structure(list(Species = c("Acanthocyclops robustus", "Acroperus harpae", 
  "Alona affinis", "Ascaphus truei", "Bosmina longirostris"), Intercept = c(-36.1182388331068, 
  -27.2140776216155, -25.7920464721491, -39.2233884219763, -31.4301301084581
  ), B = c(0.919397836908493, 0.716601987210452, 0.685455190113372, 
  1.04159758611351, 0.81077051300147), Bconf = c(0.407917065756464, 
  0.181611850119198, 0.254101713856315, 0.708582768458448, 0.234313394549538
  ), Order = c("Cyclopoida", "Diplostraca", "Diplostraca", "Anura", 
  "Diplostraca"), Family = c("Cyclopidae", "Chydoridae", "Chydoridae", 
  "Leiopelmatidae", "Bosminidae")), .Names = c("Species", "Intercept", 
  "B", "Bconf", "Order", "Family"), row.names = c(NA, 5L), class = "data.frame")

dat

# A ggplot object with NO data.  Omit the order from the facet_grid call
g <- 
  ggplot() +
  aes(Species, B) +
  geom_point() +
  facet_grid(. ~ Family,
             scales = "free", space = "free") +
  ylim(range(dat$B)) +
  xlab("")

# Build a seperate graphic for each Order and title
plots <-
  lapply(unique(dat$Order), function(o) {
           g %+% dplyr::filter_(dat, ~ Order == o) + ggtitle(o)
             })

# build as Grobs and plot via gridExtra::grid.arrange
plots %>%
  lapply(ggplotGrob) %>%
  arrangeGrob(grobs = .) %>%
  grid.arrange(., ncol = 1)

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