在R标记中嵌入标准输出 [英] Embedding plotly output in R markdown

问题描述

有 。然而，RPub似乎并不喜欢这一点。你也可以玩弄 borderwidth 来查看是否可以关闭边框。

完全可以这样说：图表不会显示在预览中。我相信这是一个浏览器限制，因为RStudio不允许发布实时Web内容（还）。

如果您有兴趣并想要一些示例代码， 这里是 2014/04/17 / plotly /rel =nofollow noreferrer>一篇博文，内嵌了Plotly和ggplot2图。希望这可以帮助！披露：我为Plotly工作。

更新：2015年8月21日

请通过Plotly文档查看此答案的 R Markdown 版本。在R控制台中打印图形对象会创建一个在线图形。例如：

  p < -  plot_ly（经济学，x =日期，y = uempmed，文件名=r-docs / knitr-example）
  

如果您使用带有HTML输出的knitr / R Markdown， c $ c> plotly 对象现在将作为iframe嵌入到HTML中。如果您使用R Markdown编写文档，只需打印 p 即可嵌入该图。

您也可以设置宽度和高度代码块参数的情节的宽度和高度。例如：{r，height = 800}设置高度。

如果您使用 Plotly Offline with R Studio ，然后在knitr中打印plotly对象还将包含必要的plotly.js文件以绘制图形：图形在文档内本地呈现。

到将knitr文档转换为独立的HTML文件，使用 knitr :: knit 和 markdown :: markdownToHTML 。例如：

  knitr :: knit（'plotly-report.Rmd'，'plotly-report.md'）
 markdown :: markdownToHTML（'plotly-report.md'，'plotly-report.html'）
  

There is a blog entry which describes embedding from the plotly API for R into R markdown. I just used the code to create the iframe for an html document

When I have the prieview in R studio there is no error message and the iframe is created in the html document. However, it is just empty. Apparently it does not load the content somehow. I did not create the plot in the R API beforehand (but that should not matter as this is just embedding a picture into html) isn't it?

My code in r markdown as it is is currently

```{r}
library("knitr")
library("devtools")
url<-"https://plot.ly/~etpinard/251"
plotly_iframe <- paste("<iframe scrolling='no' seamless='seamless' src='", url, 
    "/800/600' width='800' height='600'></iframe>", sep = "")

```
`r I(plotly_iframe)`

解决方案

We had this same issue the first time we published an RPub. Here is your code in a published RPub.

Once it's published at RPubs.com rather than in preview, the graphs should show up. You can test it by using the "open in browser" option in RPubs:

A note. I changed height to 800 and width to 650, as that graph is a bit tall. I also added a <center> tag to place it in the center of the published version.

Plotly also has a target URL for embedding. In this case, it's https://plot.ly/~etpinard/251.embed. RPubs doesn't seem to like that though. You also might play around with borderwidth to see if you can turn off the border.

That's all to say: the graphs won't show up in the preview. I believe this is a browser limitation, as RStudio doesn't allow for publishing live web content (yet).

If you're interested and would like some example code, here is the source for a blog post that has embedded Plotly and ggplot2 plots. Hope this helps! Disclosure: I work for Plotly.

Update: Aug. 21, 2015

Head to the Plotly documentation to see the R Markdown version of this answer. Printing plotly objects in the R console creates an online figure. For example:

p <- plot_ly(economics, x = date, y = uempmed, filename="r-docs/knitr-example")

If you are using knitr/R Markdown with HTML output, printing the plotly object will now embed the plot in the HTML as an iframe. If you are writing a document with R Markdown, simply printing p will embed the plot.

You can also set the width and the height of the plot with width and height code chunk parameters. For example: {r, height=800} sets the height.

If you are using Plotly Offline with R Studio, then printing the plotly object in knitr will also include the necessary plotly.js files to draw the graph: the graph is rendered locally inside the document.

To convert the knitr document to a standalone HTML file, use knitr::knit and markdown::markdownToHTML. For example:

knitr::knit('plotly-report.Rmd', 'plotly-report.md')
markdown::markdownToHTML('plotly-report.md', 'plotly-report.html')

这篇关于在R标记中嵌入标准输出的文章就介绍到这了，希望我们推荐的答案对大家有所帮助，也希望大家多多支持IT屋！