安装特定版本的生物导体包装 [英] Install a specific release of bioconductor package

问题描述

我有一个bioconductor软件包版本1.2.14，我刚刚将其更新为1.4.2版本，不幸的是我得到了不同的结果.

I had a bioconductor package version 1.2.14, and I've just updated it to version 1.4.2 and unfortunately I get different results.

我想确保这是由于软件包更新引起的.有没有办法还原到旧版本，或者删除当前版本并指定旧版本的安装?

I want to make sure this is because of the package update. Is there a way to revert to the old version, or alternatively to remove the current version and specify installation of the old one?

或者，我可以在GitHub上看到分支，我想知道它们是否对应于Bioconductor的不同版本. 那么，我可以从GitHub分支版本中安装吗?

Alternatively, I can see the branches on GitHub and I wonder whether they correspond to the different version from Bioconductor. So, can I install from a GitHub branch release?

推荐答案

Step1 在Revo R Ent的对象浏览器中，右键单击已加载的程序包"下的bioconductor程序包，然后然后点击卸载软件包.

Step1 In Object Browser (of Revo R Ent), right-click the bioconductor package under "Packages Loaded", and then click Unload Package.

第2步在Revo R Ent的对象浏览器中，右键单击已安装的软件包"下的bioconductor软件包，然后单击卸载软件包".

Step2 In Object Browser (of Revo R Ent), right-click the bioconductor package under "Packages Installed", and then click Unload Package.

Step3 (关闭R的GUI)(在我的示例中为Revo R Ent).

Step3 Close the R's GUI (in my example:Revo R Ent).

第4步(对于Revo R Ent用户)删除.xml文件:

Step4 (For Revo R Ent users) Delete the .xml file:

C:\Users\User\Documents\Revolution\32_7.3\PackageXMLs\bioconductor.xml

文件bioconductor.xml(与v1.4.2相关)具有bioconductor 1.4.2的功能，需要在R的GUI中进行处理.

The file bioconductor.xml (related with v1.4.2) has the duty of the functions of bioconductor 1.4.2 to be processed in R's GUI.

第5步:通过以下方式获取您的图书馆位置:

Step5 Get your library location via:

.libPaths()    
[1] "C:/Revolution/R-Enterprise-7.3/R-3.1.1/library"

Step6 从Windows资源管理器中的库位置删除bioconductor程序包的文件夹. (现在，您摆脱了bioconductor 1.4.2)

Step6 Delete the folder of bioconductor package from Windows Explorer in the library location. (Now, you got rid of bioconductor 1.4.2)

Step7 (打开Revo R Enterprise).安装bioconductor软件包版本1.2.14: 安装-从本地Zip文件安装软件包...-选择bioconductor 1.2.14的.zip-确定.

Step7 Open Revo R Enterprise. Install bioconductor package version 1.2.14: Install - Install Packages from Local Zip Files...- Select .zip of bioconductor 1.2.14 - OK.

现在，bioconductor文件夹(与1.2.14相关)在您的库位置中列出.

Now, bioconductor folder (related with 1.2.14) is listed in your library location.

Step8 library(bioconductor) # Now, bioconductor v. 1.2.14 works in your R's GUI.

(对于Revo R Ent用户)在C:\Users\User\Documents\Revolution\32_7.3\PackageXMLs

(For Revo R Ent users) The new file bioconductor.xml (related with v1.2.14) are created in C:\Users\User\Documents\Revolution\32_7.3\PackageXMLs

即使您关闭Revo R Ent，此.xml文件也将保留在PackageXMLs文件夹中以用作缓冲.

Even if you close Revo R Ent, this .xml file sustains in the PackageXMLs folder to act as bufferly.

尽管我为R提供了"Revolution R Enterprise" GUI的解决方案，但其他R的GUI的解决方案机制相同.

Though I gave the solution for "Revolution R Enterprise" GUI for R, the solution mechanism is the same for other R's GUIs.

这篇关于安装特定版本的生物导体包装的文章就介绍到这了，希望我们推荐的答案对大家有所帮助，也希望大家多多支持IT屋！