多处理和莳萝可以一起做什么? [英] What can multiprocessing and dill do together?

问题描述

我想在 Python 中使用 multiprocessing 库.遗憾的是，multiprocessing 使用了 pickle，它不支持带有闭包的函数、lambdas 或 __main__ 中的函数.这三个对我来说都很重要

I would like to use the multiprocessing library in Python. Sadly multiprocessing uses pickle which doesn't support functions with closures, lambdas, or functions in __main__. All three of these are important to me

In [1]: import pickle

In [2]: pickle.dumps(lambda x: x)
PicklingError: Can't pickle <function <lambda> at 0x23c0e60>: it's not found as __main__.<lambda>

幸运的是，dill 是一种更强大的泡菜.显然 dill 在导入时执行魔术以使泡菜工作

Fortunately there is dill a more robust pickle. Apparently dill performs magic on import to make pickle work

In [3]: import dill

In [4]: pickle.dumps(lambda x: x)
Out[4]: "cdill.dill
_load_type
p0
(S'FunctionType'
p1 ...

这非常令人鼓舞，特别是因为我无法访问多处理源代码.可悲的是，我仍然无法让这个非常基本的示例工作

This is very encouraging, particularly because I don't have access to the multiprocessing source code. Sadly, I still can't get this very basic example to work

import multiprocessing as mp
import dill

p = mp.Pool(4)
print p.map(lambda x: x**2, range(10))

这是为什么?我错过了什么?multiprocessing+dill组合到底有什么限制?

Why is this? What am I missing? Exactly what are the limitations on the multiprocessing+dill combination?

mrockli@mrockli-notebook:~/workspace/toolz$ python testmp.py 
    Temporary Edit for J.F Sebastian

mrockli@mrockli-notebook:~/workspace/toolz$ python testmp.py 
Exception in thread Thread-2:
Traceback (most recent call last):
  File "/home/mrockli/Software/anaconda/lib/python2.7/threading.py", line 808, in __bootstrap_inner
    self.run()
  File "/home/mrockli/Software/anaconda/lib/python2.7/threading.py", line 761, in run
    self.__target(*self.__args, **self.__kwargs)
  File "/home/mrockli/Software/anaconda/lib/python2.7/multiprocessing/pool.py", line 342, in _handle_tasks
    put(task)
PicklingError: Can't pickle <type 'function'>: attribute lookup __builtin__.function failed

^C
...lots of junk...

[DEBUG/MainProcess] cleaning up worker 3
[DEBUG/MainProcess] cleaning up worker 2
[DEBUG/MainProcess] cleaning up worker 1
[DEBUG/MainProcess] cleaning up worker 0
[DEBUG/MainProcess] added worker
[DEBUG/MainProcess] added worker
[INFO/PoolWorker-5] child process calling self.run()
[INFO/PoolWorker-6] child process calling self.run()
[DEBUG/MainProcess] added worker
[INFO/PoolWorker-7] child process calling self.run()
[DEBUG/MainProcess] added worker
[INFO/PoolWorker-8] child process calling self.run()Exception in thread Thread-2:
Traceback (most recent call last):
  File "/home/mrockli/Software/anaconda/lib/python2.7/threading.py", line 808, in __bootstrap_inner
    self.run()
  File "/home/mrockli/Software/anaconda/lib/python2.7/threading.py", line 761, in run
    self.__target(*self.__args, **self.__kwargs)
  File "/home/mrockli/Software/anaconda/lib/python2.7/multiprocessing/pool.py", line 342, in _handle_tasks
    put(task)
PicklingError: Can't pickle <type 'function'>: attribute lookup __builtin__.function failed

^C
...lots of junk...

[DEBUG/MainProcess] cleaning up worker 3
[DEBUG/MainProcess] cleaning up worker 2
[DEBUG/MainProcess] cleaning up worker 1
[DEBUG/MainProcess] cleaning up worker 0
[DEBUG/MainProcess] added worker
[DEBUG/MainProcess] added worker
[INFO/PoolWorker-5] child process calling self.run()
[INFO/PoolWorker-6] child process calling self.run()
[DEBUG/MainProcess] added worker
[INFO/PoolWorker-7] child process calling self.run()
[DEBUG/MainProcess] added worker
[INFO/PoolWorker-8] child process calling self.run()

推荐答案

multiprocessing 对酸洗做了一些错误的选择.不要误会我的意思，它做出了一些不错的选择，使其能够腌制某些类型，以便它们可以在池的地图功能中使用.然而，由于我们有 dill 可以进行酸洗，多处理自己的酸洗变得有点限制.实际上，如果 multiprocessing 要使用 pickle 而不是 cPickle... 并且还放弃一些它自己的酸洗覆盖，那么 dill 可以接管并为 multiprocessing 提供更完整的序列化.

multiprocessing makes some bad choices about pickling. Don't get me wrong, it makes some good choices that enable it to pickle certain types so they can be used in a pool's map function. However, since we have dill that can do the pickling, multiprocessing's own pickling becomes a bit limiting. Actually, if multiprocessing were to use pickle instead of cPickle... and also drop some of it's own pickling overrides, then dill could take over and give a much more full serialization for multiprocessing.

在此之前，会有一个名为 pathos 的 multiprocessing 分支(the不幸的是，发布版本有点陈旧)消除了上述限制.Pathos 还添加了多处理没有的一些不错的功能，例如 map 函数中的多参数.Pathos 即将发布，经过一些温和的更新——主要是转换为 python 3.x.

Until that happens, there's a fork of multiprocessing called pathos (the release version is a bit stale, unfortunately) that removes the above limitations. Pathos also adds some nice features that multiprocessing doesn't have, like multi-args in the map function. Pathos is due for a release, after some mild updating -- mostly conversion to python 3.x.

Python 2.7.5 (default, Sep 30 2013, 20:15:49) 
[GCC 4.2.1 (Apple Inc. build 5566)] on darwin
Type "help", "copyright", "credits" or "license" for more information.
>>> import dill
>>> from pathos.multiprocessing import ProcessingPool    
>>> pool = ProcessingPool(nodes=4)
>>> result = pool.map(lambda x: x**2, range(10))
>>> result
[0, 1, 4, 9, 16, 25, 36, 49, 64, 81]

只是为了展示一下 pathos.multiprocessing 可以做什么...

and just to show off a little of what pathos.multiprocessing can do...

>>> def busy_add(x,y, delay=0.01):
...     for n in range(x):
...        x += n
...     for n in range(y):
...        y -= n
...     import time
...     time.sleep(delay)
...     return x + y
... 
>>> def busy_squared(x):
...     import time, random
...     time.sleep(2*random.random())
...     return x*x
... 
>>> def squared(x):
...     return x*x
... 
>>> def quad_factory(a=1, b=1, c=0):
...     def quad(x):
...         return a*x**2 + b*x + c
...     return quad
... 
>>> square_plus_one = quad_factory(2,0,1)
>>> 
>>> def test1(pool):
...     print pool
...     print "x: %s
" % str(x)
...     print pool.map.__name__
...     start = time.time()
...     res = pool.map(squared, x)
...     print "time to results:", time.time() - start
...     print "y: %s
" % str(res)
...     print pool.imap.__name__
...     start = time.time()
...     res = pool.imap(squared, x)
...     print "time to queue:", time.time() - start
...     start = time.time()
...     res = list(res)
...     print "time to results:", time.time() - start
...     print "y: %s
" % str(res)
...     print pool.amap.__name__
...     start = time.time()
...     res = pool.amap(squared, x)
...     print "time to queue:", time.time() - start
...     start = time.time()
...     res = res.get()
...     print "time to results:", time.time() - start
...     print "y: %s
" % str(res)
... 
>>> def test2(pool, items=4, delay=0):
...     _x = range(-items/2,items/2,2)
...     _y = range(len(_x))
...     _d = [delay]*len(_x)
...     print map
...     res1 = map(busy_squared, _x)
...     res2 = map(busy_add, _x, _y, _d)
...     print pool.map
...     _res1 = pool.map(busy_squared, _x)
...     _res2 = pool.map(busy_add, _x, _y, _d)
...     assert _res1 == res1
...     assert _res2 == res2
...     print pool.imap
...     _res1 = pool.imap(busy_squared, _x)
...     _res2 = pool.imap(busy_add, _x, _y, _d)
...     assert list(_res1) == res1
...     assert list(_res2) == res2
...     print pool.amap
...     _res1 = pool.amap(busy_squared, _x)
...     _res2 = pool.amap(busy_add, _x, _y, _d)
...     assert _res1.get() == res1
...     assert _res2.get() == res2
...     print ""
... 
>>> def test3(pool): # test against a function that should fail in pickle
...     print pool
...     print "x: %s
" % str(x)
...     print pool.map.__name__
...     start = time.time()
...     res = pool.map(square_plus_one, x)
...     print "time to results:", time.time() - start
...     print "y: %s
" % str(res)
... 
>>> def test4(pool, maxtries, delay):
...     print pool
...     m = pool.amap(busy_add, x, x)
...     tries = 0
...     while not m.ready():
...         time.sleep(delay)
...         tries += 1
...         print "TRY: %s" % tries
...         if tries >= maxtries:
...             print "TIMEOUT"
...             break
...     print m.get()
... 
>>> import time
>>> x = range(18)
>>> delay = 0.01
>>> items = 20
>>> maxtries = 20
>>> from pathos.multiprocessing import ProcessingPool as Pool
>>> pool = Pool(nodes=4)
>>> test1(pool)
<pool ProcessingPool(ncpus=4)>
x: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17]

map
time to results: 0.0553691387177
y: [0, 1, 4, 9, 16, 25, 36, 49, 64, 81, 100, 121, 144, 169, 196, 225, 256, 289]

imap
time to queue: 7.91549682617e-05
time to results: 0.102381229401
y: [0, 1, 4, 9, 16, 25, 36, 49, 64, 81, 100, 121, 144, 169, 196, 225, 256, 289]

amap
time to queue: 7.08103179932e-05
time to results: 0.0489699840546
y: [0, 1, 4, 9, 16, 25, 36, 49, 64, 81, 100, 121, 144, 169, 196, 225, 256, 289]

>>> test2(pool, items, delay)
<built-in function map>
<bound method ProcessingPool.map of <pool ProcessingPool(ncpus=4)>>
<bound method ProcessingPool.imap of <pool ProcessingPool(ncpus=4)>>
<bound method ProcessingPool.amap of <pool ProcessingPool(ncpus=4)>>

>>> test3(pool)
<pool ProcessingPool(ncpus=4)>
x: [0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17]

map
time to results: 0.0523059368134
y: [1, 3, 9, 19, 33, 51, 73, 99, 129, 163, 201, 243, 289, 339, 393, 451, 513, 579]

>>> test4(pool, maxtries, delay)
<pool ProcessingPool(ncpus=4)>
TRY: 1
TRY: 2
TRY: 3
TRY: 4
TRY: 5
TRY: 6
TRY: 7
[0, 2, 4, 6, 8, 10, 12, 14, 16, 18, 20, 22, 24, 26, 28, 30, 32, 34]

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