SunGridEngine，Condor，Torque作为PVM的资源管理器 [英] SunGridEngine, Condor, Torque as Resource Managers for PVM

问题描述

任何人都知道哪种资源管理器适合PVM?还是我不应该使用PVM而是依靠MPI(或其任何版本，例如MPICH-2 [还有其他更好的版本吗?]).使用PVM的主要原因是因为在我之前从事此项目的人开始使用PVM.但是，既然这个项目属于我(他没有做过任何依赖PVM的重要工作)，则可以轻松更改此项目，最好更改为易于安装的项目，因为安装和设置PVM麻烦很大.

Anyone have any idea which Resource manager is good for PVM? Or should I not have used PVM and instead relied on MPI (or any version of it, such as MPICH-2 [are there any other ones that are better?]). Main reason for using PVM was because the person before me who started this project assumed the use of PVM. However, now that this project is mine (he hasn't done any significant work that relies on PVM) this can be easily changed, preferably to something that is easy to install because installing and setting up PVM was a big hassle.

我倾向于SunGridEngine，因为我有专用的硬件，在阅读了另一篇文章中介绍专用硬件更好的文章之后，SGE似乎是赢家.但是我不确定使用PVM的性能.想知道是否有人对PVM和SGE有任何经验吗?

I'm leaning towards SunGridEngine seeing as how I have dedicated hardware, and after reading up on another post of which ones are better for dedicated hardware, SGE seems to be the winner. However I'm unsure of its performance using PVM. Wondering if anyone have had any experience with PVM and SGE?

如果人们使用SGE，您将使用什么来在计算机与计算机之间(或在虚拟机与虚拟机之间)进行通信

If people use SGE, what do you use to communicate from computer to computer (or virtual machine to virtual machine)

哦，如果这很重要，我将运行Perl应用程序/行.

Oh and I will be running Perl applications/lines if this matters.

有什么建议或想法吗?

首先感谢所有评论，

• 泰格(Tyug)

推荐答案

我在使用Torque，SGE和LSF的Linux系统上运行PVM不会出现任何问题.您是否在问是否可以使用SGE，Torque等来运行PVM应用程序?"

I run PVM on Linux systems using Torque, SGE and LSF without any problems. Are you asking "Is it possible to use SGE, Torque, etc. to run PVM applications?"?

如果是这样，请查看下面的示例Linux c-shell作业脚本.请注意，这些脚本几乎相同，只是每个脚本的标头都与每个资源管理器的相应格式一致.

If so, check out my example Linux c-shell job scripts below. Note the scripts are nearly identical, except for the header of each script, which conforms to the appropriate format for each resource manager.

SGE作业脚本:

#!/bin/csh
#$ -N LTR-001
#$ -o LTR-001.output
#$ -e LTR-001.error
#$ -pe comp 24
#$ -l h_rt=04:00:00
#$ -A cmit2
#$ -cwd
#$ -V

# Setup envirnoment
setenv LD_LIBRARY_PATH /lfs0/projects/cmit2/opt-intel/overture-noX/lib:${LD_LIBRARY_PATH}
setenv PVM_ARCH LINUX
setenv PVM_ROOT /lfs0/projects/cmit2/opt-intel/pvm3
setenv PVM_BIN ${PVM_ROOT}/bin
setenv PVM_RSH /usr/bin/ssh
setenv MY_HOSTS pvm_hostfile

rm -f ~/.pvmprofile
env | grep PVM_ > ~/.pvmprofile

# Create file containing _unique_ host names.  Note that there are two possible sources of available hosts
sort -k 1,1 -u ${MACHINE_FILE} >! ${MY_HOSTS}

# Start PVM & add nodes
printf "%s\n%s\n" conf quit|${PVM_ROOT}/lib/pvm ${MY_HOSTS}
wait
sleep 2

#
# Run apps requiring PVM.
#

wait
# Exit PVM daemon
echo "reset" | $PVM_ROOT/lib/pvm
echo "halt" | $PVM_ROOT/lib/pvm

扭矩作业脚本:

#!/bin/csh
#PBS -N LTR-001
#PBS -o LTR-001.output
#PBS -e LTR-001.error
#PBS -l nodes=3:ppn=8
#PBS -l walltime=04:00:00
#PBS -q compute
#PBS -d .

# Setup envirnoment
setenv LD_LIBRARY_PATH /users/ps14/opt-intel/overture/lib:${LD_LIBRARY_PATH}
setenv PVM_ARCH LINUX64
setenv PVM_ROOT /users/ps14/opt-intel/pvm3
setenv PVM_BIN ${PVM_ROOT}/bin
setenv PVM_RSH ${PVM_ROOT}/ssh
setenv MY_HOSTS pvm_hostfile

rm -f ~/.pvmprofile
env | grep PVM_ > ~/.pvmprofile

# Create file containing _unique_ host names.  Note that there are two possible sources of available hosts
sort -k 1,1 -u ${PBS_NODEFILE} >! ${MY_HOSTS}

# Start PVM & add nodes
printf "%s\n%s\n" conf quit|${PVM_ROOT}/lib/pvm ${MY_HOSTS}
wait
sleep 2

#
# Run apps requiring PVM.
#

wait
# Exit PVM daemon
echo "reset" | $PVM_ROOT/lib/pvm
echo "halt" | $PVM_ROOT/lib/pvm

这篇关于SunGridEngine，Condor，Torque作为PVM的资源管理器的文章就介绍到这了，希望我们推荐的答案对大家有所帮助，也希望大家多多支持IT屋！