CythonGSL/在Windows上通过Cython使用GSL [英] CythonGSL/ Using GSL on Windows via Cython

查看：93 发布时间：2021/4/28 18:34:51 python windows cython gsl

本文介绍了CythonGSL/在Windows上通过Cython使用GSL的处理方法，对大家解决问题具有一定的参考价值，需要的朋友们下面随着小编来一起学习吧！

问题描述

机器配置:我的配置是Windows 7 x64，安装了python 2.7和cython 0.18(全部64位).我还安装了MS C ++ 2008 Visual Studio.

Machine Configuration: My config is windows 7 x64, with python 2.7 and cython 0.18 (all 64 bit ) installed. I also have MS C++ 2008 Visual Studio installed.

我有GSL二进制文件，并且路径指向GSL \ Bin.

I have the GSL binaries and have Path pointed to the GSL\Bin.

我正在使用MS VS 2008 + SDK 7.0来编译cython .pyx文件.我使用SDK 7.0命令提示符将其编译为c和cython.

I am using MS VS 2008 + SDK 7.0 to compile cython .pyx files. I use the SDK 7.0 command prompt to compile to c and cython.

问题但是，在编译时，我收到LINK错误2019，这表明未在GSL文件夹中找到头文件.

Problem However at compilation time I get a LINK error 2019, which indicates the header files in the GSL folder are not being found .

我的尝试为了解决这个问题，我下载了CythonGSL.使用来自cythonGSL cimport *"无效.我转到了该软件包的init文件，并更改了它似乎正在搜索的目录以适合我安装GSL的位置.我已经更新了CythonGSL自述文件中显示的setup.py.

My Attempts To resolve this I downloaded CythonGSL. using "from cythonGSL cimport *" didnt work. I went to the init file for this package and changed the directories it appears to be searching for to fit where I have installed GSL. I have updated the setup.py as shown on the CythonGSL readme.

这无效！编译时，它说找不到gsl.lib.

This hasnt worked either!! At compile time, it says gsl.lib not found.

有什么主意我可以解决这个问题吗?

Any idea how i can fix this?

一种选择是，例如，我可以指向一个静态地址来代替

One option is if I could point a static address for example, in place of

    cdef extern from "libcalg/queue.h":
       with
    cdef extern from "FUll File Path/queue.h":

暂时不起作用.

setup.py

from distutils.core import setup
from Cython.Distutils import Extension
from Cython.Distutils import build_ext
import cython_gsl
import numpy as np
setup(

    include_dirs = [cython_gsl.get_include(), np.get_include()],
    cmdclass = {'build_ext': build_ext},
    ext_modules = [Extension("lda_gibbs_cython",
                             ["lda_gibbs_cython.pyx"],
                             libraries=cython_gsl.get_libraries(),
                             library_dirs=[cython_gsl.get_library_dir()],
                             include_dirs=[cython_gsl.get_cython_include_dir()])]
    )

唯一的区别是我包含np.get_include()

The only difference is I include np.get _include()

我的.pyx文件:(从 https:/借来进行测试/github.com/twiecki/CythonGSL/blob/master/examples/gibbs.pyx )

My .pyx file : (borrowed for testing from https://github.com/twiecki/CythonGSL/blob/master/examples/gibbs.pyx )

import numpy as np
cimport numpy as np
cimport cython
DTYPE = np.int
ctypedef np.int_t DTYPE_t
from scipy.special import gammaln
from cython_gsl cimport *

cdef gsl_rng *r = gsl_rng_alloc(gsl_rng_mt19937)

来自Cython GSL尝试的错误消息:

Error message from the Cython GSL attempt:

D:\LDA\pythonLDA>setup.py build_ext --inplace
running build_ext
cythoning lda_gibbs_cython.pyx to lda_gibbs_cython.c
building 'lda_gibbs_cython' extension
C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\Bin\amd64\cl.exe /c /nolog
o /Ox /MD /W3 /GS- /DNDEBUG -IC:\Python27\lib\site-packages -IC:/GSL/include -IC
:\Python27\lib\site-packages\numpy\core\include -IC:\Python27\include -IC:\Pytho
n27\PC /Tclda_gibbs_cython.c /Fobuild\temp.win-amd64-2.7\Release\lda_gibbs_cytho
n.obj
lda_gibbs_cython.c
c:\python27\lib\site-packages\numpy\core\include\numpy\npy_deprecated_api.h(8) :
 Warning Msg: Using deprecated NumPy API, disable it by #defining NPY_NO_DEPRECA
TED_API NPY_1_7_API_VERSION
lda_gibbs_cython.c(2812) : warning C4244: 'function' : conversion from '__int64'
 to 'long', possible loss of data
lda_gibbs_cython.c(4811) : warning C4101: 'getbuffer_cobj' : unreferenced local
variable
lda_gibbs_cython.c(4842) : warning C4101: 'releasebuffer_cobj' : unreferenced lo
cal variable
C:\Program Files (x86)\Microsoft Visual Studio 9.0\VC\Bin\amd64\link.exe /DLL /n
ologo /INCREMENTAL:NO /LIBPATH:C:/GSL/lib /LIBPATH:C:\Python27\libs /LIBPATH:C:\
Python27\PCbuild\amd64 gsl.lib gslcblas.lib /EXPORT:initlda_gibbs_cython build\t
emp.win-amd64-2.7\Release\lda_gibbs_cython.obj /OUT:D:\LDA\pythonLDA\lda_
gibbs_cython.pyd /IMPLIB:build\temp.win-amd64-2.7\Release\lda_gibbs_cython.lib /
MANIFESTFILE:build\temp.win-amd64-2.7\Release\lda_gibbs_cython.pyd.manifest /MAN
IFEST
LINK : fatal error LNK1181: cannot open input file 'gsl.lib'
error: command 'link.exe' failed with exit status 1181

GCC尝试

我安装了TDM-GCC，因此可以使用标准的cmd窗口:

I installed TDM-GCC so i could use the standard cmd window:

.pyx和setup.py保持不变.我在这里记录并解决了一个问题

.pyx, and setup.py remain the same.I had an issue documented and resolved here -mno-cygwin : gcc building Mercurial (Windows 2000) . Still no cigar. I dont know if this should be a separate question - will move if the experts think so.

D:\LDA\pythonLDA>setup.py build_ext --inplace -c mingw32
running build_ext
skipping 'lda_gibbs_cython.c' Cython extension (up-to-date)
building 'lda_gibbs_cython' extension
C:\MinGW64\bin\gcc.exe -mdll -O -Wall -IC:\Python27\lib\site-packages -IC:/GSL/i
nclude -IC:\Python27\lib\site-packages\numpy\core\include -IC:\Python27\include
-IC:\Python27\PC -c lda_gibbs_cython.c -o build\temp.win-amd64-2.7\Release\lda_g
ibbs_cython.o
writing build\temp.win-amd64-2.7\Release\lda_gibbs_cython.def
C:\MinGW64\bin\gcc.exe -shared -s build\temp.win-amd64-2.7\Release\lda_gibbs_cyt
hon.o build\temp.win-amd64-2.7\Release\lda_gibbs_cython.def -LC:/GSL/lib -LC:\Py
thon27\libs -LC:\Python27\PCbuild\amd64 -lgsl -lgslcblas -lpython27 -l -o D:\LDA\pythonLDA\lda_gibbs_cython.pyd
gcc: error: D:\LDA\pythonLDA\lda_gibbs_cython.pyd: No such file or direct
ory
error: command 'gcc' failed with exit status 1

CythonGSL/在Windows上通过Cython使用GSL [英] CythonGSL/ Using GSL on Windows via Cython

问题描述

推荐答案

相关文章

Python最新文章

热门教程

热门工具

登录关闭

CythonGSL/在Windows上通过Cython使用GSL [英] CythonGSL/ Using GSL on Windows via Cython

问题描述

推荐答案

相关文章

Python最新文章

热门教程

热门工具

登录 关闭

登录关闭