如何使用ggplot2从geom_tile(热图)中删除白线 [英] how to remove white lines from geom_tile (heat map) using ggplot2

问题描述

我无法删除热图中图块之间的白线.下面是我的代码和图片.有人遇到过吗?

t <- ggplot(Drug_heatmap_df_final, 
   aes(x=reorder(Drug,Total_Deaths), y=Start_Date, fill=Total_Deaths)) + 
   geom_tile() + 
   labs(title="Heatmap of Total Deaths per month by Drug", x="Drug", y="Month") + 
   theme(plot.title = element_text(hjust=.5)) +
   scale_y_date(date_breaks="1 year" , labels = date_format("%b-%Y")) +
   theme(axis.text.x = element_text(size=13)) 

plot(t)

解决方案

我不知道这是否是最优雅的解决方案，但是如果您在aes中添加color，然后使用您可以使它们重叠并删除白线:

首先是我的数据用白线显示的样子:

ggplot(mydf, aes(x=grp, y=date, fill=n)) + 
  geom_tile()

现在，我将颜色设置为与填充和混乱大小相同的对象:

ggplot(mydf, aes(x=grp, y=date, fill=n,color=n)) + 
  geom_tile(size=0.6) 

就像我说的那样，可能不是最优雅的解决方案，并且可能有一种更好，更有效的方法来确定大小值(而不是像我那样反复试验)，但总的来说，这似乎可以解决您的问题. /p>

I am having trouble removing the white lines between tiles in my heat map. Below is my code and picture. Has anyone encountered this before?

t <- ggplot(Drug_heatmap_df_final, 
   aes(x=reorder(Drug,Total_Deaths), y=Start_Date, fill=Total_Deaths)) + 
   geom_tile() + 
   labs(title="Heatmap of Total Deaths per month by Drug", x="Drug", y="Month") + 
   theme(plot.title = element_text(hjust=.5)) +
   scale_y_date(date_breaks="1 year" , labels = date_format("%b-%Y")) +
   theme(axis.text.x = element_text(size=13)) 

plot(t)

解决方案

I don't know if this is the most elegant solution but if you add color in your aes and then play with the size in geom_tile you can get them to overlap and remove the white lines:

First is how my data looks with the white lines:

ggplot(mydf, aes(x=grp, y=date, fill=n)) + 
  geom_tile()

Now I set my color to the same object as my fill and mess with the size:

ggplot(mydf, aes(x=grp, y=date, fill=n,color=n)) + 
  geom_tile(size=0.6) 

Like I said, probably not the most elegant solution, and there is probably a better, more efficient way to determine the size value (instead of trial and error like I did) but in general this seems to solve your issue.

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